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  5. Differential Display Reverse Transcription Polymerase Chain Reaction (DDRT-PCR) for Grey Oyster mushroom samples grown with acoustic sound treatment
 
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Differential Display Reverse Transcription Polymerase Chain Reaction (DDRT-PCR) for Grey Oyster mushroom samples grown with acoustic sound treatment

Journal
IOP Conference Series: Earth and Environmental Science
ISSN
1755-1307
1755-1315
Date Issued
2023
Author(s)
Tham Khai Song
Universiti Malaysia Perlis
Norsahira Ezrin Mohd Zamri
Universiti Malaysia Perlis
Roshita Ibrahim
Universiti Malaysia Perlis
Johan Ariff Mohtar
Universiti Malaysia Perlis
Hartinee Abbas
Universiti Utara Malaysia
Ahmad Mukhlis Abdul Rahman
Universiti Malaysia Perlis
DOI
10.1088/1755-1315/1216/1/012018
Handle (URI)
https://iopscience.iop.org/article/10.1088/1755-1315/1216/1/012018/pdf
https://iopscience.iop.org/article/10.1088/1755-1315/1216/1/012018
https://iopscience.iop.org/
https://hdl.handle.net/20.500.14170/15565
Abstract
Grey oyster mushroom is the most often farmed and marketed type of mushroom for household consumption in Malaysia. The mushroom cultivation takes a long time due to its complicated mycelium growth. Several treatments were introduced such as acoustic sound treatment to increase the growth rate and quality of the crop, but there is no in-depth study regarding the genetic expression of the genes affected. This study aims to evaluate the Differential Display Reverse Transcriptase-Polymerase Chain Reaction (DDRT-PCR) for grey oyster mushroom samples grown with acoustic sound treatment. The mushroom was subjected to the treatment and the RNA was extracted from the mushroom samples and converted into cDNA before undergoing DDRT-PCR. Ten Differential Expressed Transcripts (DETs) that were successfully identified based on the differences between the intensity and absence of amplicons were sent for gene sequencing and BLAST through the NCBI database to obtain relevant results regarding the possible gene annotation. Seven out of ten DETs hit potential genes encoding for housekeeping and structural and development functions. The results showed that acoustic sound treatment did affect the expression of certain genes differently as captured by DDRT-PCR analyses and offers new ideas for the development of ecological agriculture.
File(s)
Differential Display Reverse Transcription Polymerase Chain Reaction (DDRT-PCR) for Grey Oyster Mushroom Samples Grown with Acoustic Sound Treatment.pdf (101.62 KB)
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